org.jrdf.graph.global.index.longindex
Interface MoleculeStructureIndex<T>

All Known Implementing Classes:

MoleculeStructureIndexMem, MoleculeStructureIndexSesame, MoleculeStructureIndexSesameSync

public interface MoleculeStructureIndex<T>

The generic interface for storing indexed global molecules.

Method Summary

void	add(T... quin)
void	clear()
void	close()
boolean	contains(T first)
boolean	containsPIDMID(Long pid, Long mid)
ClosableIterator<Long>	getAllFourthIndex()
ClosableIterator<Long>	getFifthIndex(Long first, Long second, Long third, Long fourth)
ClosableIterator<Long>	getFourthForOneValue(Long first)
ClosableIterator<Long>	getFourthForTwoValues(Long first, Long second)
ClosableIterator<Long[]>	getFourthIndex(Long first, Long second, Long third)
ClosableIterator<Long>	getFourthIndexOnly(Long first, Long second, Long third)
long	getSize()
ClosableIterator<T[]>	getSubIndex(T first)
ClosableIterator<T[]>	getSubSubIndex(T first, T second)
ClosableIterator<T[]>	iterator()
void	remove(T... quin)
boolean	removeSubIndex(T first)

Method Detail

add

void add(T... quin)
         throws GraphException

Throws:

GraphException

remove

void remove(T... quin)
            throws GraphException

Throws:

GraphException

clear

void clear()

iterator

ClosableIterator<T[]> iterator()

getSubIndex

ClosableIterator<T[]> getSubIndex(T first)

getSubSubIndex

ClosableIterator<T[]> getSubSubIndex(T first,
                                     T second)

contains

boolean contains(T first)

removeSubIndex

boolean removeSubIndex(T first)

getSize

long getSize()

close

void close()

getFifthIndex

ClosableIterator<Long> getFifthIndex(Long first,
                                     Long second,
                                     Long third,
                                     Long fourth)

containsPIDMID

boolean containsPIDMID(Long pid,
                       Long mid)

getFourthIndex

ClosableIterator<Long[]> getFourthIndex(Long first,
                                        Long second,
                                        Long third)

getFourthIndexOnly

ClosableIterator<Long> getFourthIndexOnly(Long first,
                                          Long second,
                                          Long third)

getFourthForTwoValues

ClosableIterator<Long> getFourthForTwoValues(Long first,
                                             Long second)

getFourthForOneValue

ClosableIterator<Long> getFourthForOneValue(Long first)

getAllFourthIndex

ClosableIterator<Long> getAllFourthIndex()